STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34574.1DNA-binding helix-turn-helix protein; KEGG: taf:THA_1570 2.5e-13 lexA; LexA repressor; K01356 repressor LexA; Psort location: Cytoplasmic, score: 8.96. (216 aa)    
Predicted Functional Partners:
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 
 0.985
KRT34575.1
Putative DNA polymerase V subunit UmuC; KEGG: dat:HRM2_40900 2.1e-87 umuC1; UmuC1 K03502; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.978
KRT36205.1
Putative DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
   
  
 0.779
KRT34576.1
KEGG: ebi:EbC_pEb17201510 6.3e-17 umuD; DNA polymerase V subunit; K03503 DNA polymerase V; Belongs to the peptidase S24 family.
 
     0.679
KRT34573.1
Putative 4-hydroxybenzoyl-CoA reductase subunit gamma; KEGG: nth:Nther_0766 2.6e-34 (2Fe-2S)-binding domain protein; K03518 carbon-monoxide dehydrogenase small subunit; Psort location: Cytoplasmic, score: 9.26.
       0.594
KRT34561.1
Putative ATP-dependent helicase PcrA; KEGG: aco:Amico_1179 3.0e-184 UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.531
KRT36312.1
Hypothetical protein; KEGG: sce:YML061C 1.7e-46 PIF1, TST1; DNA helicase; exists in two forms; the nuclear form is involved in telomere formation and elongation; acts as a catalytic inhibitor of telomerase; the mitochondrial form is involved in repair and recombination of mitochondrial DNA; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.499
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.461
KRT34968.1
Molybdopterin binding domain protein; KEGG: cco:CCC13826_0279 1.5e-21 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
     
 0.449
KRT35962.1
KEGG: tai:Taci_0812 5.6e-32 biotin/acetyl-CoA-carboxylase ligase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase; Psort location: Cytoplasmic, score: 9.97.
      
 0.431
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.