STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34700.1Putative 4-aminobutyrate transaminase; KEGG: pab:PAB0086 2.0e-162 pyridoxal phosphate-dependent aminotransferase; K00823 4-aminobutyrate aminotransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (460 aa)    
Predicted Functional Partners:
KRT34923.1
KEGG: tai:Taci_1436 0. pyruvate ferredoxin/flavodoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.837
KRT36391.1
Hypothetical protein; KEGG: sat:SYN_00363 2.6e-31 glutamate synthase [NADPH] small chain; Psort location: Cytoplasmic, score: 9.97.
    
 0.727
KRT34807.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: vfi:VF_A0100 1.0e-144 yeiT; oxidoreductase; Psort location: Cytoplasmic, score: 9.97.
    
 0.727
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
     
 0.702
KRT34406.1
Hydrolase, carbon-nitrogen family; KEGG: bce:BC4034 1.2e-59 nitrilase K08590; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.659
KRT35472.1
KEGG: rru:Rru_A0914 3.1e-102 aldehyde dehydrogenase K04021; Psort location: Cytoplasmic, score: 8.96.
  
 0.655
KRT34874.1
Aminotransferase, class V; KEGG: dhd:Dhaf_4850 1.7e-78 alanine--glyoxylate transaminase; Psort location: Cytoplasmic, score: 9.97.
  
 0.623
KRT36315.1
Aminotransferase, class III; KEGG: tro:trd_1515 7.2e-71 acetylornithine aminotransferase; K05830 acetylornithine/acetyl-lysine aminotransferase; Psort location: Cytoplasmic, score: 9.26; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
0.621
KRT35870.1
Cytidylyltransferase; KEGG: npu:Npun_R0688 2.8e-53 acylneuraminate cytidylyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
      0.603
KRT35144.1
Sarcosine oxidase, beta subunit family; KEGG: tai:Taci_0968 1.8e-147 FAD dependent oxidoreductase; K00303 sarcosine oxidase, subunit beta; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.584
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.