STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34746.1Transcriptional regulator, PadR family; Psort location: Cytoplasmic, score: 8.96. (97 aa)    
Predicted Functional Partners:
KRT34745.1
KEGG: rcu:RCOM_1381510 1.3e-32 phosphate abc transporter, putative; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.835
KRT34744.1
TIGR00245 family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.813
KRT34747.1
Hypothetical protein.
       0.561
KRT35482.1
KEGG: sis:LS215_0347 2.3e-51 daunorubicin resistance ABC transporter ATPase subunit K09687; Psort location: Cytoplasmic, score: 9.12.
  
  
 0.423
KRT34609.1
Putative bacitracin ABC transporter, ATP-binding protein BcrA; KEGG: nde:NIDE3435 2.8e-46 ABC transporter ATPase K01990; Psort location: Cytoplasmic, score: 9.12.
  
  
 0.423
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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