STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34777.1Putative arsenate reductase; KEGG: glo:Glov_0597 1.4e-33 protein tyrosine phosphatase; K03741 arsenate reductase; Psort location: Cytoplasmic, score: 9.97; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (125 aa)    
Predicted Functional Partners:
KRT35732.1
KEGG: hpa:HPAG1_0810 1.1e-17 thioredoxin K03671; Psort location: Cytoplasmic, score: 9.97; Belongs to the thioredoxin family.
  
 
 0.927
KRT36468.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: tde:TDE0153 1.7e-197 coenzyme A disulfide reductase, putative; K00359 NADH oxidase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.718
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.690
KRT35659.1
KEGG: aco:Amico_1496 3.8e-200 ABC transporter related protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA; Psort location: CytoplasmicMembrane, score: 10.00.
   
 
 0.657
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
   0.638
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
   
   0.636
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.634
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
    
   0.631
KRT34827.1
Phosphoribulokinase/uridine kinase family protein; KEGG: tai:Taci_1361 5.0e-182 AAA ATPase; K00876 uridine kinase; Psort location: Cytoplasmic, score: 9.97.
  
 0.502
KRT34780.1
Putative serine protease MucD; KEGG: aco:Amico_0697 1.7e-140 protease Do.
  
  
 0.501
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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