STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34821.1Iron chelate uptake ABC transporter, FeCT family, permease protein; KEGG: bgl:bglu_1g28200 1.7e-13 ABC-type cobalamin/Fe3 -siderophores transport systems ATPase component; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (327 aa)    
Predicted Functional Partners:
KRT34820.1
ABC transporter, ATP-binding protein; KEGG: pfu:PF0909 5.8e-46 ferric enterobactin transport ATP-binding protein; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
KRT35494.1
Achromobactin ABC transporter, ATP-binding protein CbrD family protein; KEGG: sat:SYN_00216 1.6e-57 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; K02013 iron complex transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.59.
 0.998
KRT35524.1
Periplasmic binding protein; KEGG: bao:BAMF_3696 0.00014 RBAM_035840; iron compound ABC transporter, substrate-binding protein FeuA.
 
 0.996
KRT35495.1
Periplasmic binding protein.
 
 0.995
KRT34822.1
KEGG: gwc:GWCH70_2733 5.8e-13 global transcriptional regulator, catabolite control protein A K02529; Psort location: Cytoplasmic, score: 9.97.
       0.618
KRT34823.1
Hypothetical protein.
       0.412
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.