STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34828.1KEGG: bpm:BURPS1710b_A0449 3.9e-63 glycine betaine/L-proline ABC transporter, permease protein K02001; Psort location: CytoplasmicMembrane, score: 10.00. (282 aa)    
Predicted Functional Partners:
KRT34829.1
KEGG: aco:Amico_0033 6.8e-91 ABC transporter related protein; K02000 glycine betaine/proline transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00.
 0.999
KRT34830.1
ABC transporter, substrate-binding protein, QAT family; KEGG: rcp:RCAP_rcp00102 3.4e-25 proX2; glycine betaine/L-proline ABC transporter substrate-binding protein ProX-2 K02002; Psort location: Periplasmic, score: 9.44.
 
 0.999
KRT35380.1
ABC transporter, substrate-binding protein, QAT family; KEGG: rcp:RCAP_rcp00102 8.1e-24 proX2; glycine betaine/L-proline ABC transporter substrate-binding protein ProX-2 K02002.
 
 0.998
KRT36443.1
ABC transporter, substrate-binding protein, QAT family; KEGG: rcp:RCAP_rcp00102 1.3e-32 proX2; glycine betaine/L-proline ABC transporter substrate-binding protein ProX-2 K02002.
 
 0.998
KRT36446.1
ABC transporter, substrate-binding protein, QAT family; KEGG: rcp:RCAP_rcp00102 3.1e-24 proX2; glycine betaine/L-proline ABC transporter substrate-binding protein ProX-2 K02002; Psort location: Periplasmic, score: 9.76.
 
 0.998
KRT35512.1
Putative glycine betaine/carnitine/choline-binding protein; KEGG: lmf:LMOf2365_1441 1.0e-55 glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein K05845:K05846; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
  
 0.914
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
  
 0.553
KRT35511.1
Putative choline transport system permease protein opuBB; KEGG: lwe:lwe1444 6.0e-51 opuCB; glycine betaine/L-proline ABC transporter, permease protein K05846; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
0.539
KRT34827.1
Phosphoribulokinase/uridine kinase family protein; KEGG: tai:Taci_1361 5.0e-182 AAA ATPase; K00876 uridine kinase; Psort location: Cytoplasmic, score: 9.97.
       0.489
KRT34826.1
ErfK/YbiS/YcfS/YnhG; Psort location: Cytoplasmic, score: 8.96.
       0.477
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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