STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34841.1KEGG: ani:AN8699.2 0.00029 hypothetical protein; K11843 ubiquitin carboxyl-terminal hydrolase 14. (138 aa)    
Predicted Functional Partners:
KRT34842.1
KEGG: thx:Thet_0993 1.4e-26 ATP/cobalamin adenosyltransferase; Psort location: Cytoplasmic, score: 9.97.
       0.663
KRT36386.1
Hypothetical protein; KEGG: dba:Dbac_1826 3.2e-29 phenylacetate--CoA ligase K01912; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.609
purA
Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
  
    0.589
KRT35472.1
KEGG: rru:Rru_A0914 3.1e-102 aldehyde dehydrogenase K04021; Psort location: Cytoplasmic, score: 8.96.
    
 0.561
KRT35582.1
acyl-CoA thioester hydrolase, YbgC/YbaW family; KEGG: sat:SYN_00892 2.7e-23 thioesterase K07107; Psort location: Cytoplasmic, score: 9.97.
    
 0.559
KRT34838.1
Transaminase; KEGG: cbl:CLK_0518 1.3e-94 transaminase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.558
KRT34835.1
Sodium/pantothenate symporter; KEGG: hiq:CGSHiGG_00405 4.0e-38 cytidine deaminase K11928; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.554
KRT34836.1
Hypothetical protein; KEGG: ctu:Ctu_03310 1.3e-07 yhdT; hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.554
ilvD-2
KEGG: tte:TTE0020 6.3e-191 ilvD; dihydroxy-acid dehydratase; K01687 dihydroxy-acid dehydratase; Psort location: Cytoplasmic, score: 9.97; Belongs to the IlvD/Edd family.
       0.554
KRT34839.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.554
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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