STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34844.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (254 aa)    
Predicted Functional Partners:
KRT34843.1
Transcriptional regulator, GntR family; KEGG: msm:MSMEG_3400 2.1e-14 glutamyl-tRNA(Gln) amidotransferase subunit A K01957; Psort location: Cytoplasmic, score: 9.97.
  
    0.768
KRT34842.1
KEGG: thx:Thet_0993 1.4e-26 ATP/cobalamin adenosyltransferase; Psort location: Cytoplasmic, score: 9.97.
       0.624
KRT35655.1
Permease, YjgP/YjgQ family; KEGG: hip:CGSHiEE_03515 1.3e-13 leucyl aminopeptidase K11720; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.505
KRT34841.1
KEGG: ani:AN8699.2 0.00029 hypothetical protein; K11843 ubiquitin carboxyl-terminal hydrolase 14.
  
    0.505
KRT35648.1
Outer membrane protein, OMP85 family; KEGG: cre:CHLREDRAFT_195498 2.1e-20 OEP80; chloroplast outer envelope protein K07277; Psort location: OuterMembrane, score: 9.96.
  
   
 0.482
KRT34661.1
OstA-like protein.
  
    0.477
KRT35912.1
Outer membrane protein.
  
     0.463
KRT35905.1
Hypothetical protein; KEGG: lsp:Bsph_1990 5.2e-07 5'-nucleotidase precursor K01081; Psort location: OuterMembrane, score: 9.95.
  
     0.459
KRT36457.1
Radical SAM domain protein; KEGG: coc:Coch_1410 0.00029 biotin synthase K01012; Psort location: Cytoplasmic, score: 8.96.
  
     0.401
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.