STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34855.1PHP domain protein; KEGG: cpo:COPRO5265_0176 7.3e-39 PHP domain, putative K07053; Psort location: Cytoplasmic, score: 8.96. (249 aa)    
Predicted Functional Partners:
KRT34856.1
Hypothetical protein.
 
     0.957
KRT34857.1
4Fe-4S binding domain protein; KEGG: kol:Kole_1794 1.7e-17 ferredoxin hydrogenase; Psort location: Cytoplasmic, score: 8.96.
 
     0.956
KRT34858.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: lsp:Bsph_4299 5.4e-11 serine/threonine-protein kinase RsbT; Psort location: Cytoplasmic, score: 8.96.
 
     0.911
KRT34859.1
Hypothetical protein.
 
     0.906
KRT34853.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bpu:BPUM_1247 4.7e-09 kinE; sporulation sensor histidine kinase E K13533; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.902
KRT34852.1
Hypothetical protein; KEGG: mta:Moth_1718 2.6e-27 NADH dehydrogenase (quinone) K00335; Psort location: Cytoplasmic, score: 8.96.
 
     0.900
KRT34851.1
Protein HymB; KEGG: aco:Amico_1556 5.3e-249 NADH dehydrogenase (quinone) K00335; Psort location: Cytoplasmic, score: 9.12.
 
   
 0.627
KRT34854.1
KEGG: aco:Amico_1558 3.2e-61 NADH dehydrogenase (ubiquinone) 24 kDa subunit; K00334 NADH dehydrogenase I subunit E; Psort location: Cytoplasmic, score: 9.12.
       0.581
KRT34561.1
Putative ATP-dependent helicase PcrA; KEGG: aco:Amico_1179 3.0e-184 UvrD/REP helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA; Psort location: Cytoplasmic, score: 9.97.
    
  0.468
KRT34850.1
2Fe-2S iron-sulfur cluster binding domain protein; KEGG: aco:Amico_1555 9.4e-220 NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein; K00123 formate dehydrogenase, alpha subunit; Psort location: Cytoplasmic, score: 9.12.
       0.418
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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