STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34895.1Metallo-beta-lactamase domain protein; KEGG: pab:PAB1188 9.8e-51 CDP-abequose synthase; Psort location: Cytoplasmic, score: 9.97. (269 aa)    
Predicted Functional Partners:
KRT34896.1
Methyl-accepting chemotaxis protein signaling domain protein; KEGG: ccv:CCV52592_0395 9.4e-20 UDP-N-acetylmuramate--L-alanine ligase (UDP-N-acetylmuramoyl-L-alanine synthetase) K03406; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.703
KRT35418.1
Diguanylate cyclase domain protein; KEGG: syn:sll1687 3.2e-27 hypothetical protein; K00936; Psort location: Cytoplasmic, score: 9.97.
   
  0.687
KRT36234.1
HDIG domain protein; KEGG: dat:HRM2_32750 4.1e-29 putative signal transduction protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.641
KRT34984.1
Hypothetical protein; KEGG: tai:Taci_1676 5.5e-41 CobB/CobQ domain protein glutamine amidotransferase; K02224 cobyrinic acid a,c-diamide synthase; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.630
KRT35319.1
Superoxide reductase; KEGG: tna:CTN_1928 1.8e-44 putative superoxide reductase; K05919 superoxide reductase.
  
  
 0.622
KRT35617.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.611
KRT34893.1
Phosphodiesterase family protein; KEGG: dth:DICTH_0950 1.2e-31 phosphodiesterase YfcE K07095.
     
 0.535
KRT34894.1
KEGG: aco:Amico_0287 4.0e-70 homoserine dehydrogenase K00003; Psort location: Cytoplasmic, score: 9.97.
       0.532
KRT34891.1
PHP domain protein; KEGG: dal:Dalk_2742 1.3e-48 ribonuclease III; Psort location: Cytoplasmic, score: 9.97.
       0.526
KRT35629.1
Type IV pilus assembly protein PilZ; Psort location: Cytoplasmic, score: 8.96.
  
     0.523
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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