STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34913.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: aco:Amico_0409 1.6e-105 integral membrane sensor signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00. (460 aa)    
Predicted Functional Partners:
KRT34914.1
Response regulator receiver domain protein; KEGG: npu:Npun_R2407 5.4e-34 two component LuxR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
 0.990
KRT36151.1
KEGG: npu:Npun_R2420 1.0e-25 two component LuxR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
 
 0.947
KRT36384.1
Response regulator receiver domain protein; KEGG: fal:FRAAL1304 7.7e-35 putative protein-glutamate methylesterase; Psort location: Cytoplasmic, score: 9.97.
 0.947
KRT34920.1
KEGG: lsg:lse_0600 4.9e-49 cheV; chemotaxis protein CheV K03415; Psort location: Cytoplasmic, score: 9.97.
  
 0.754
KRT35405.1
Diguanylate cyclase domain protein; KEGG: mag:amb3329 9.6e-107 hypothetical protein; K13924 two-component system, chemotaxis family, CheB/CheR fusion protein; Psort location: CytoplasmicMembrane, score: 7.88.
  
 0.578
KRT34915.1
Hypothetical protein.
       0.509
KRT35454.1
KEGG: bbe:BBR47_03220 1.3e-12 adaA; AdaA protein; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.505
KRT35620.1
Chemotaxis protein CheY; KEGG: cbk:CLL_A0802 2.7e-39 sporulation initiation phosphotransferase F K03413; Psort location: Cytoplasmic, score: 9.26.
    
 0.496
KRT35418.1
Diguanylate cyclase domain protein; KEGG: syn:sll1687 3.2e-27 hypothetical protein; K00936; Psort location: Cytoplasmic, score: 9.97.
   
 0.489
KRT36274.1
CheR methyltransferase, SAM binding domain protein; KEGG: tai:Taci_0862 9.4e-78 MCP methyltransferase, CheR-type K00575; Psort location: Cytoplasmic, score: 9.97.
   
  0.480
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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