STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34939.1Putative ferritin-1; Iron-storage protein. (173 aa)    
Predicted Functional Partners:
KRT35319.1
Superoxide reductase; KEGG: tna:CTN_1928 1.8e-44 putative superoxide reductase; K05919 superoxide reductase.
  
  
 0.851
KRT35747.1
Rubredoxin; KEGG: sat:SYN_02123 3.7e-19 ferric-chelate reductase / rubredoxin; Psort location: Cytoplasmic, score: 9.26.
  
  
 0.766
KRT34937.1
TIGR02757 family protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.764
KRT34938.1
Rubredoxin family protein; KEGG: sat:SYN_02123 3.1e-38 ferric-chelate reductase / rubredoxin; Psort location: Cytoplasmic, score: 8.96.
       0.733
KRT34940.1
FAD dependent oxidoreductase; KEGG: gox:GOX1630 5.2e-18 putative oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.96.
       0.709
KRT36100.1
KEGG: dsa:Desal_0898 3.3e-27 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C); Psort location: Cytoplasmic, score: 9.26.
  
  
 0.639
KRT36099.1
Hypothetical protein; KEGG: cre:CHLREDRAFT_155464 2.7e-09 PRX2; 2-cys peroxiredoxin K03386.
  
  
 0.639
KRT34936.1
2Fe-2S iron-sulfur cluster binding domain protein; KEGG: apb:SAR116_1080 1.6e-50 probable electron transfer protein; Psort location: Cytoplasmic, score: 8.96.
       0.581
rpsP
Ribosomal protein S16; KEGG: apb:SAR116_1817 1.3e-18 ribosomal protein S16 K02959; Psort location: Cytoplasmic, score: 9.26; Belongs to the bacterial ribosomal protein bS16 family.
  
    0.561
KRT34941.1
Putative NAD-dependent deacetylase; KEGG: pmo:Pmob_1359 2.2e-78 silent information regulator protein Sir2; K12410 NAD-dependent deacetylase; Psort location: Cytoplasmic, score: 9.97.
       0.538
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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