STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34953.1Hypothetical protein. (70 aa)    
Predicted Functional Partners:
KRT34954.1
Putative membrane protein FdrA; KEGG: asc:ASAC_1072 2.7e-15 succinyl-CoA synthetase alpha chain K01902; Psort location: Cytoplasmic, score: 8.96.
       0.781
KRT34952.1
Hypothetical protein.
       0.777
KRT34955.1
Hypothetical protein.
       0.750
KRT34951.1
Putative cyclase; KEGG: bah:BAMEG_1843 1.2e-10 kynB; arylformamidase K07130; Psort location: Cytoplasmic, score: 8.96.
       0.709
KRT34949.1
KEGG: tai:Taci_0416 7.3e-55 (2Fe-2S)-binding domain protein; K03518 carbon-monoxide dehydrogenase small subunit; Psort location: Cytoplasmic, score: 9.97.
       0.540
KRT34950.1
KEGG: tai:Taci_0415 6.3e-72 molybdopterin dehydrogenase FAD-binding protein; K03519 carbon-monoxide dehydrogenase medium subunit; Psort location: Cytoplasmic, score: 9.97.
       0.540
KRT34948.1
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein; KEGG: clj:CLJU_c23590 1.4e-151 coxL; aerobic-type CO dehydrogenase large subunit; Psort location: Cytoplasmic, score: 8.96.
       0.520
KRT34956.1
III protein, CoA-transferase family; KEGG: tai:Taci_0409 2.8e-133 formyl-CoA transferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the CoA-transferase III family.
       0.505
KRT34957.1
Hydrolase, carbon-nitrogen family; KEGG: rha:RHA1_ro03918 7.6e-28 formamidase K01455; Psort location: Cytoplasmic, score: 9.26.
       0.498
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.