STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35015.1Hypothetical protein; Psort location: Cytoplasmic, score: 9.97; Belongs to the D-glutamate cyclase family. (265 aa)    
Predicted Functional Partners:
KRT35908.1
Hypothetical protein; KEGG: cti:RALTA_B1244 1.5e-25 putative aspartate/glutamate/hydantoin racemase; Psort location: Cytoplasmic, score: 8.96.
     0.973
KRT35020.1
Transporter, branched chain amino acid:cation symporter family protein; KEGG: hiq:CGSHiGG_02375 2.4e-111 argininosuccinate synthase; Psort location: CytoplasmicMembrane, score: 10.00.
    0.965
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
 
    0.963
KRT35019.1
TIGR00370 family protein; KEGG: fnu:FN0437 5.7e-55 allophanate hydrolase; Psort location: Cytoplasmic, score: 9.97.
 
    0.955
KRT35017.1
Hypothetical protein; KEGG: aco:Amico_0497 2.9e-51 UreA amidolyase related protein; Psort location: Cytoplasmic, score: 9.97.
  
    0.924
KRT35018.1
Hypothetical protein; KEGG: aco:Amico_0497 2.1e-39 UreA amidolyase related protein; Psort location: Cytoplasmic, score: 9.26.
  
    0.924
KRT35021.1
Macro domain protein; KEGG: isc:IscW_ISCW004288 2.1e-16 MACRO domain-containing protein, putative; Psort location: Cytoplasmic, score: 8.96.
       0.444
KRT34447.1
IclR helix-turn-helix protein; KEGG: hiq:CGSHiGG_08780 3.1e-11 araD; L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 9.97.
  
    0.432
KRT34497.1
KEGG: apb:SAR116_2133 3.7e-13 transcriptional regulator, IclR family; Psort location: Cytoplasmic, score: 9.97.
  
    0.432
KRT36474.1
Transcriptional regulator, IclR family protein; KEGG: hiq:CGSHiGG_08780 4.2e-27 araD; L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 9.97.
  
    0.432
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.