STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35144.1Sarcosine oxidase, beta subunit family; KEGG: tai:Taci_0968 1.8e-147 FAD dependent oxidoreductase; K00303 sarcosine oxidase, subunit beta; Psort location: Cytoplasmic, score: 9.97. (385 aa)    
Predicted Functional Partners:
KRT35147.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: tga:TGAM_0357 1.1e-92 pdhA; proline dehydrogenase, alpha subunit (PdhA); K00302 sarcosine oxidase, subunit alpha.
 0.999
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
 
 0.997
KRT35146.1
4Fe-4S binding domain protein; KEGG: dat:HRM2_04900 3.7e-10 soxA1; SoxA1; Psort location: Cytoplasmic, score: 8.96.
 
 0.989
KRT36468.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: tde:TDE0153 1.7e-197 coenzyme A disulfide reductase, putative; K00359 NADH oxidase; Psort location: Cytoplasmic, score: 9.97.
  
 0.981
KRT35145.1
[2Fe-2S]-binding domain protein; KEGG: cpo:COPRO5265_1207 2.3e-19 opine oxidase subunit A (octopine oxidase subunit A); Psort location: Cytoplasmic, score: 8.96.
 
 
  0.969
KRT35148.1
Hypothetical protein; KEGG: tga:TGAM_0357 4.4e-29 pdhA; proline dehydrogenase, alpha subunit (PdhA); K00302 sarcosine oxidase, subunit alpha; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.967
KRT35559.1
KEGG: tai:Taci_0141 1.9e-196 homocysteine S-methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.890
KRT35140.1
Dehydrogenase, FMN-dependent; KEGG: tye:THEYE_A0075 4.4e-87 hydroxyacid oxidase 1; Psort location: Cytoplasmic, score: 9.97.
   
 
 0.874
KRT34580.1
KEGG: tai:Taci_0021 4.9e-136 isocitrate dehydrogenase, NADP-dependent K00031; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.868
KRT35695.1
8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
  
 
 0.866
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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