STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35154.1KEGG: apb:SAR116_0666 1.7e-21 DNA repair protein RadC K03630; Psort location: Cytoplasmic, score: 9.97; Belongs to the UPF0758 family. (309 aa)    
Predicted Functional Partners:
KRT35887.1
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
 
  
 0.876
KRT35786.1
KEGG: apb:SAR116_0709 6.2e-09 cell shape-determining protein K03570; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.862
KRT35860.1
Hypothetical protein; KEGG: chu:CHU_3495 4.7e-06 purF; amidophosphoribosyltransferase K00764.
  
    0.810
KRT35593.1
KEGG: apb:SAR116_0616 2.3e-37 DNA protecting protein DprA K04096; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.615
KRT34968.1
Molybdopterin binding domain protein; KEGG: cco:CCC13826_0279 1.5e-21 fadD; long-chain-fatty-acid--CoA ligase K03743; Psort location: Cytoplasmic, score: 8.96; Belongs to the CinA family.
     
 0.588
KRT35155.1
SagB-type dehydrogenase domain protein; KEGG: tth:TTC1977 2.5e-22 glucose-1-phosphate adenylyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
     0.561
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
 
   
 0.478
KRT34804.1
Glycosyltransferase, group 2 family protein; KEGG: sat:SYN_00376 2.6e-34 cell wall biogenesis glycosyltransferase K00786; Psort location: Cytoplasmic, score: 9.97.
  
    0.470
KRT35623.1
KEGG: apb:SAR116_0821 1.3e-09 flagellar biosynthetic protein FliQ K02420; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.457
KRT34653.1
ComEC/Rec2-like protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.447
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.