STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35162.1TRAP transporter, DctM subunit; KEGG: apb:SAR116_0058 2.6e-66 TRAP dicarboxylate transporter, DctM subunit; Psort location: CytoplasmicMembrane, score: 10.00. (427 aa)    
Predicted Functional Partners:
KRT35164.1
KEGG: apb:SAR116_0250 3.2e-29 TRAP dicarboxylate transporter-DctP subunit; Psort location: Periplasmic, score: 9.76.
  
 0.981
KRT35163.1
TRAP transporter, DctQ-like membrane protein; KEGG: psa:PST_2201 2.9e-09 hypothetical protein; K00851 gluconokinase; Psort location: CytoplasmicMembrane, score: 10.00.
 0.975
KRT36498.1
KEGG: apb:SAR116_0250 4.4e-32 TRAP dicarboxylate transporter-DctP subunit; Psort location: Periplasmic, score: 9.76.
  
 0.953
KRT35159.1
KEGG: apb:SAR116_0250 6.9e-27 TRAP dicarboxylate transporter-DctP subunit; Psort location: Periplasmic, score: 10.00.
  
 0.895
KRT36497.1
TRAP transporter, DctQ-like membrane protein; KEGG: apb:SAR116_0059 5.7e-07 TRAP dicarboxylate transporter, DctQ subunit; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.843
KRT34701.1
Bacterial extracellular solute-binding protein, family 7; KEGG: apb:SAR116_0480 8.1e-09 TRAP dicarboxylate transporter-DctP subunit; Psort location: Periplasmic, score: 9.44.
 
  
 0.790
KRT36407.1
Bacterial extracellular solute-binding protein, family 7; KEGG: apb:SAR116_0250 1.2e-10 TRAP dicarboxylate transporter-DctP subunit.
  
 0.768
KRT35160.1
TRAP transporter, DctQ-like membrane protein; KEGG: psa:PST_2201 3.9e-10 hypothetical protein; K00851 gluconokinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.717
KRT34702.1
TRAP transporter, DctM subunit; KEGG: apb:SAR116_0249 6.5e-54 TRAP dicarboxylate transporter-DctM subunit; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 
0.618
KRT36409.1
TRAP transporter, DctQ-like membrane protein; KEGG: apb:SAR116_2137 0.0013 mannitol transporter; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.560
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.