STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34419.1ATP-grasp domain protein; KEGG: ach:Achl_3187 2.1e-10 phosphoribosylamine--glycine ligase; K01945 phosphoribosylamine--glycine ligase. (325 aa)    
Predicted Functional Partners:
KRT34420.1
Putative H4MPT-linked C1 transfer pathway protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.974
KRT34421.1
Amino acid kinase family protein.
 
   
 0.954
KRT34422.1
KEGG: msl:Msil_2396 4.0e-31 hypothetical protein; K01633 dihydroneopterin aldolase.
 
   
 0.779
KRT35002.1
KEGG: psl:Psta_0063 5.7e-126 formylmethanofuran dehydrogenase subunit A; K00200 formylmethanofuran dehydrogenase subunit A; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.776
ffsA
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT); Belongs to the FTR family.
 
     0.760
mch
Methenyltetrahydromethanopterin cyclohydrolase; Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl- H(4)MPT; Belongs to the MCH family.
 
     0.757
KRT35005.1
ATP-grasp domain protein; KEGG: bcl:ABC2553 1.7e-05 carB; carbamoyl phosphate synthase large subunit K01955.
 
     0.753
KRT34994.1
KEGG: mpt:Mpe_A2626 3.3e-43 formylmethanofuran dehydrogenase, subunit C K00202.
 
     0.747
KRT35000.1
Flavoprotein; KEGG: abi:Aboo_0701 1.7e-06 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX; Psort location: Cytoplasmic, score: 8.96.
 
     0.744
KRT34991.1
KEGG: psl:Psta_4265 9.7e-44 triphosphoribosyl-dephospho-CoA protein; K05966 triphosphoribosyl-dephospho-CoA synthase; Psort location: Cytoplasmic, score: 8.96.
  
     0.740
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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