STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35174.1Putative oligopeptide ABC transporter, permease protein AppC; KEGG: apb:SAR116_0601 1.2e-54 binding-protein-dependent transport systems inner membrane component K02034; Psort location: CytoplasmicMembrane, score: 10.00. (292 aa)    
Predicted Functional Partners:
KRT35173.1
ABC transporter, permease protein; KEGG: amt:Amet_2908 1.3e-71 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.993
KRT35170.1
KEGG: bao:BAMF_1209 1.4e-90 appD; oligopeptide ABC transporter (ATP-binding protein); Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.991
KRT35171.1
Oligopeptide ABC transporter, ATP-binding protein AppF; KEGG: bao:BAMF_0976 2.4e-88 oppF1; spermidine/putrescine import ATP-binding protein PotA; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the ABC transporter superfamily.
 0.988
KRT36327.1
KEGG: bmq:BMQ_3406 3.6e-76 appD; oligopeptide ABC transporter, ATP-binding protein AppD K02031; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.986
KRT35290.1
Oligopeptide ABC transporter, ATP-binding protein AppD; KEGG: reh:H16_B1125 1.2e-98 ABC transporter ATPase K02031; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.986
KRT35390.1
Oligopeptide transport ATP-binding protein OppD family protein; KEGG: sis:LS215_0504 3.7e-51 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.983
KRT36328.1
KEGG: bao:BAMF_1210 1.7e-78 appF; oligopeptide ABC transporter (ATP-binding protein); Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.983
KRT35289.1
KEGG: bra:BRADO1097 5.6e-96 oppF; oligopeptide ABC transporter ATP-binding protein K02032; Psort location: CytoplasmicMembrane, score: 9.99.
 0.979
KRT35389.1
KEGG: sis:LS215_2567 2.2e-44 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032; Psort location: CytoplasmicMembrane, score: 9.98.
 
 0.971
KRT35292.1
ABC transporter, permease protein; KEGG: amt:Amet_2908 1.9e-79 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.961
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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