STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35175.1Peptidase C26; KEGG: fnu:FN0505 5.8e-30 anthranilate synthase component II K07010; Psort location: Cytoplasmic, score: 8.96. (246 aa)    
Predicted Functional Partners:
KRT36357.1
Renal dipeptidase family protein; KEGG: aco:Amico_1648 1.4e-106 membrane dipeptidase K01273; Psort location: Cytoplasmic, score: 8.96.
     0.923
KRT35174.1
Putative oligopeptide ABC transporter, permease protein AppC; KEGG: apb:SAR116_0601 1.2e-54 binding-protein-dependent transport systems inner membrane component K02034; Psort location: CytoplasmicMembrane, score: 10.00.
       0.711
KRT35176.1
Amidohydrolase family protein; KEGG: aar:Acear_0086 2.2e-101 N-acyl-D-amino-acid deacylase; Psort location: Cytoplasmic, score: 9.97.
       0.628
KRT35173.1
ABC transporter, permease protein; KEGG: amt:Amet_2908 1.3e-71 nickel-transporting ATPase K02033; Psort location: CytoplasmicMembrane, score: 10.00.
       0.620
KRT35472.1
KEGG: rru:Rru_A0914 3.1e-102 aldehyde dehydrogenase K04021; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.572
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
    
  0.523
KRT35237.1
Aminotransferase, class III; KEGG: bbe:BBR47_20930 3.8e-104 yodT; hypothetical protein; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.519
KRT35854.1
KEGG: tai:Taci_1141 1.6e-176 L-lysine 6-transaminase; K03918 L-lysine 6-transaminase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.511
KRT34700.1
Putative 4-aminobutyrate transaminase; KEGG: pab:PAB0086 2.0e-162 pyridoxal phosphate-dependent aminotransferase; K00823 4-aminobutyrate aminotransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.511
KRT36024.1
Agmatinase; KEGG: pth:PTH_0946 6.6e-61 speB; arginase/agmatinase/formimionoglutamate hydrolase; K01480 agmatinase; Psort location: Cytoplasmic, score: 8.96; Belongs to the arginase family.
    
 0.468
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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