STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35197.1PQQ enzyme repeat protein; KEGG: shn:Shewana3_1087 3.8e-06 undecaprenol kinase, rRNA (guanine-N(1)-)-methyltransferase K02674. (1071 aa)    
Predicted Functional Partners:
KRT35198.1
Hypothetical protein.
  
  
 0.957
KRT35200.1
Prepilin-type cleavage/methylation protein; Overlaps another CDS with the same product name.
  
  
 0.952
KRT35195.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.933
KRT35191.1
Bacterial type II/III secretion system short domain protein; Psort location: OuterMembrane, score: 8.28.
 
   
 0.931
KRT35194.1
Hypothetical protein.
  
  
 0.810
KRT35864.1
Flagellar hook-associated protein 3; KEGG: apb:SAR116_0842 7.0e-14 flagellin, N-terminal K02397; Psort location: Extracellular, score: 9.71.
  
   
 0.788
KRT35196.1
Hypothetical protein.
       0.773
KRT35192.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.760
KRT35199.1
Prepilin-type cleavage/methylation protein; Overlaps another CDS with the same product name.
  
  
 0.745
KRT34321.1
Citrate transporter; KEGG: apb:SAR116_0249 0.00012 TRAP dicarboxylate transporter-DctM subunit; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.743
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.