STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35215.1Efflux transporter, RND family, MFP subunit; KEGG: rcp:RCAP_rcc02894 8.2e-11 mdtE; multidrug resistance protein MdtE K03585; Psort location: CytoplasmicMembrane, score: 7.88; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (384 aa)    
Predicted Functional Partners:
KRT35213.1
Efflux ABC transporter, permease protein; KEGG: ppd:Ppro_3235 1.4e-113 hypothetical protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
 0.998
KRT35214.1
KEGG: sat:SYN_01994 2.2e-69 ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
 0.991
KRT35216.1
Outer membrane efflux protein; KEGG: ccv:CCV52592_0160 9.1e-05 fadD; long-chain-fatty-acid--CoA ligase K12340; Psort location: OuterMembrane, score: 9.96.
 0.986
KRT34876.1
Heavy metal efflux pump, CzcA family; KEGG: ddd:Dda3937_02820 1.9e-109 yegN, mdtB; acriflavin resistance plasma membrane protein K07788; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.974
KRT34308.1
KEGG: vap:Vapar_4267 0.00024 RND efflux system, outer membrane lipoprotein, NodT family K00694; Psort location: OuterMembrane, score: 9.93.
 0.941
KRT34878.1
Outer membrane efflux protein; KEGG: ccv:CCV52592_0160 4.1e-11 fadD; long-chain-fatty-acid--CoA ligase K12340; Psort location: OuterMembrane, score: 9.92.
 0.903
KRT36224.1
KEGG: tai:Taci_1459 7.9e-216 PTS system, glucose-specific IIBC subunit; K02763 PTS system, D-glucosamine-specific IIA component; K02764 PTS system, D-glucosamine-specific IIB component K02765; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.800
KRT35217.1
Aminotransferase, class I/II; KEGG: rsl:RPSI07_3183 1.4e-58 transcriptional regulators containing a dna-binding hth domain and an aminotransferase domain transcription regulator protein; Psort location: Cytoplasmic, score: 9.97.
  
    0.528
KRT35212.1
Secondary thiamine-phosphate synthase enzyme; KEGG: bao:BAMF_2926 4.1e-24 yrpB; putative anionic nitroalkane dioxygenase.
       0.482
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.