STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35368.1Putative membrane protein; KEGG: apb:SAR116_2069 8.3e-13 ABC transporter, membrane spanning protein; Psort location: CytoplasmicMembrane, score: 10.00. (303 aa)    
Predicted Functional Partners:
KRT36098.1
AzlC protein; KEGG: apb:SAR116_0734 2.0e-50 AzlC-like protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.539
KRT35369.1
Rubredoxin; KEGG: cco:CCC13826_1910 8.2e-15 enolase (2-phosphoglycerate dehydratase; 2-phospho-D-glycerate hydro-lyase); Psort location: Cytoplasmic, score: 8.96.
  
    0.499
KRT36367.1
Putative membrane protein; KEGG: sna:Snas_0956 3.9e-09 peptide methionine sulfoxide reductase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.492
KRT35674.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.461
KRT35418.1
Diguanylate cyclase domain protein; KEGG: syn:sll1687 3.2e-27 hypothetical protein; K00936; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.431
KRT36417.1
Putative YbaK/EbsC protein; KEGG: ddd:Dda3937_04156 7.6e-12 ybaK; bifunctional cys-tRNA Pro deacetylase/cys-tRNA Cys deacylase; Psort location: Cytoplasmic, score: 9.97.
 
     0.407
KRT35123.1
Putative membrane protein; KEGG: sna:Snas_0956 3.7e-07 peptide methionine sulfoxide reductase; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.403
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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