STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35509.1Hypothetical protein. (49 aa)    
Predicted Functional Partners:
KRT35508.1
Hypothetical protein; KEGG: tai:Taci_0121 3.2e-28 ABC transporter related protein; K10441 ribose transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.773
KRT35510.1
KEGG: bao:BAMF_3236 4.8e-97 opuCA; glycine betaine/carnitine/choline ABC transporter (ATP-binding protein); Psort location: CytoplasmicMembrane, score: 7.88.
       0.544
KRT35511.1
Putative choline transport system permease protein opuBB; KEGG: lwe:lwe1444 6.0e-51 opuCB; glycine betaine/L-proline ABC transporter, permease protein K05846; Psort location: CytoplasmicMembrane, score: 10.00.
       0.540
KRT35512.1
Putative glycine betaine/carnitine/choline-binding protein; KEGG: lmf:LMOf2365_1441 1.0e-55 glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein K05845:K05846; Psort location: CytoplasmicMembrane, score: 7.88.
       0.536
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.