STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT34371.1Hypothetical protein. (49 aa)    
Predicted Functional Partners:
KRT34370.1
Hypothetical protein.
       0.773
KRT34369.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.615
KRT34372.1
Polysaccharide biosynthesis protein; KEGG: vfi:VF_0348 2.8e-11 sensor protein UhpB K00936; Psort location: CytoplasmicMembrane, score: 10.00.
       0.474
KRT34373.1
KEGG: geo:Geob_2929 1.1e-90 nucleotide sugar dehydrogenase K00012; Psort location: Cytoplasmic, score: 9.97.
       0.416
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.