STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT35169.1Hypothetical protein. (44 aa)    
Predicted Functional Partners:
KRT35170.1
KEGG: bao:BAMF_1209 1.4e-90 appD; oligopeptide ABC transporter (ATP-binding protein); Psort location: CytoplasmicMembrane, score: 9.99.
       0.553
KRT35171.1
Oligopeptide ABC transporter, ATP-binding protein AppF; KEGG: bao:BAMF_0976 2.4e-88 oppF1; spermidine/putrescine import ATP-binding protein PotA; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the ABC transporter superfamily.
       0.511
KRT35168.1
Tungsten formylmethanofuran dehydrogenase, subunit E, FwdE; KEGG: aco:Amico_0056 1.5e-47 formylmethanofuran dehydrogenase subunit E region; K11261 formylmethanofuran dehydrogenase subunit E; Psort location: Cytoplasmic, score: 8.96.
       0.423
KRT35172.1
ABC transporter, substrate-binding protein, family 5; KEGG: gwc:GWCH70_0479 2.4e-63 4-phytase K02035; Psort location: Periplasmic, score: 9.44.
       0.414
Your Current Organism:
Acetomicrobium hydrogeniformans
NCBI taxonomy Id: 592015
Other names: A. hydrogeniformans ATCC BAA-1850, Acetomicrobium hydrogeniformans ATCC BAA-1850, Anaerobaculum hydrogeniforman DSM 22491, Anaerobaculum hydrogeniforman OS1, Anaerobaculum sp. OS1
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