STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESL03675.1Putative geranyltranstransferase; KEGG: cac:CAC2080 9.2e-58 predicted geranylgeranyl pyrophosphate synthase K00795; Psort location: Cytoplasmic, score: 9.98; Belongs to the FPP/GGPP synthase family. (307 aa)    
Predicted Functional Partners:
ESL04562.1
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.976
xseA
Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
 
  
 0.961
dxs
1-deoxy-D-xylulose-5-phosphate synthase family protein; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
  
 0.958
ESL02074.1
KEGG: ctc:CTC01025 9.9e-22 heptaprenyl diphosphate synthase component I K00805; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.934
ESL03677.1
KEGG: cff:CFF8240_1111 1.0e-26 rrmJ; ribosomal RNA large subunit methyltransferase J K00599; Psort location: Cytoplasmic, score: 8.87.
 
    0.930
ESL04570.1
S1 RNA binding domain protein; KEGG: cno:NT01CX_2096 3.3e-37 RpsA K03527; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.918
xseB
Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
  
  
 0.915
nadK
NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
 
 
   0.875
nusB
Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
  
    0.866
cmk
Cytidylate kinase; KEGG: chy:CHY_1927 9.4e-49 cmk; cytidylate kinase K00945; Psort location: Cytoplasmic, score: 8.87.
 
 
  0.776
Your Current Organism:
Catonella morbi
NCBI taxonomy Id: 592026
Other names: C. morbi ATCC 51271, Catonella morbi ATCC 51271, Catonella morbi str. ATCC 51271, Catonella morbi strain ATCC 51271
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