STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESL03371.1Cell envelope-like function transcriptional attenuator common domain protein. (424 aa)    
Predicted Functional Partners:
ESL03370.1
TrkA protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.635
ESL04680.1
KEGG: tcx:Tcr_1675 7.1e-67 undecaprenyl-phosphate galactosephosphotransferase K03606; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.611
ESL03779.1
NAD dependent epimerase/dehydratase family protein; KEGG: vfi:VF0192 5.3e-78 UDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase K00100; Psort location: Cytoplasmic, score: 8.87.
     
 0.610
ESL04128.1
comEA protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.572
ESL04397.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: mta:Moth_0911 2.9e-55 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 10.00.
 
   
 0.521
ESL03372.1
GAF domain-containing protein A family protein; Psort location: Cytoplasmic, score: 8.87.
       0.509
codY
CodY helix-turn-helix protein; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.
  
   
 0.479
ESL04729.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.443
recF
DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.
  
     0.428
sepF
Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
  
   
 0.410
Your Current Organism:
Catonella morbi
NCBI taxonomy Id: 592026
Other names: C. morbi ATCC 51271, Catonella morbi ATCC 51271, Catonella morbi str. ATCC 51271, Catonella morbi strain ATCC 51271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.