STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESL03258.1TIGR02679 family protein; Psort location: Cytoplasmic, score: 8.87. (427 aa)    
Predicted Functional Partners:
ESL03259.1
Hypothetical protein; KEGG: fnu:FN0522 3.3e-19 exonuclease SBCC K03546; Psort location: Extracellular, score: 7.62.
 
     0.960
ESL03260.1
TIGR02678 family protein; Psort location: Cytoplasmic, score: 8.87.
 
     0.914
ESL03261.1
TIGR02677 family protein.
 
     0.914
ESL02034.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.571
ESL02256.1
Transposase, IS4 family; Psort location: Cytoplasmic, score: 8.87.
  
     0.560
ESL03396.1
Hypothetical protein.
  
     0.510
ESL03255.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.504
ESL03256.1
Hypothetical protein.
       0.504
ESL03257.1
Hypothetical protein.
       0.504
ESL03324.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.486
Your Current Organism:
Catonella morbi
NCBI taxonomy Id: 592026
Other names: C. morbi ATCC 51271, Catonella morbi ATCC 51271, Catonella morbi str. ATCC 51271, Catonella morbi strain ATCC 51271
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.