STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESL01929.1Branched-chain amino acid ABC transporter, permease protein; KEGG: eco:b4460 1.9e-08 araH; fused L-arabinose transporter subunits of ABC superfamily: membrane components K02057; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family. (384 aa)    
Predicted Functional Partners:
ESL01930.1
ABC transporter, ATP-binding protein; KEGG: cpe:CPE1579 5.3e-149 probable ABC transporter K02056; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.995
ESL01928.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: eco:b4460 3.5e-08 araH; fused L-arabinose transporter subunits of ABC superfamily: membrane components K02057; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
0.983
ESL04553.1
KEGG: gka:GK1284 1.2e-153 ABC transporter (ATP-binding protein) K02056; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.981
ESL04550.1
Hypothetical protein; KEGG: msm:MSMEG_3090 0.0012 ribose transport system permease protein RbsC; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.978
ESL01931.1
Basic membrane protein.
 
 
 0.974
ESL04551.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.969
ESL04554.1
Basic membrane protein; KEGG: sde:Sde_2490 7.3e-05 2-isopropylmalate synthase K01179.
 
 
 0.950
ESL01927.1
Amidohydrolase family protein; KEGG: ctc:CTC02226 7.3e-65 atrazine chlorohydrolase K01564; Psort location: Cytoplasmic, score: 8.87.
 
     0.817
ESL01926.1
Oxidoreductase, NAD-binding domain protein; KEGG: bme:BMEI1388 5.2e-18 oxidoreductase K00100; Psort location: Cytoplasmic, score: 8.87.
 
     0.673
ESL01925.1
Cupin family protein.
       0.620
Your Current Organism:
Catonella morbi
NCBI taxonomy Id: 592026
Other names: C. morbi ATCC 51271, Catonella morbi ATCC 51271, Catonella morbi str. ATCC 51271, Catonella morbi strain ATCC 51271
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.