STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESL01587.1KEGG: spr:spr1792 2.5e-144 lysA; diaminopimelate decarboxylase K01586; Psort location: Cytoplasmic, score: 8.87. (418 aa)    
Predicted Functional Partners:
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
  
 0.972
ESL03360.1
Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.
    
 0.969
ESL01902.1
Aspartate kinase; KEGG: ctc:CTC02356 1.9e-128 aspartate kinase K00928; Psort location: Cytoplasmic, score: 8.87; Belongs to the aspartokinase family.
   
 0.968
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
  
 0.935
ESL03650.1
KEGG: spd:SPD_0812 4.6e-182 lys1; saccharopine dehydrogenase K00290; Psort location: CytoplasmicMembrane, score: 7.80.
  
 
 0.926
murE
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
     
 0.919
ESL03684.1
Iron-only hydrogenase maturation rSAM protein HydE; KEGG: bth:BT1835 1.6e-99 biotin synthetase K01012; Psort location: Cytoplasmic, score: 8.87.
    
 0.837
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.826
ESL04157.1
Orn/Lys/Arg decarboxylase, major domain protein; KEGG: tte:TTE0093 3.5e-74 ldcC; Arginine/lysine/ornithine decarboxylases K01582; Psort location: Cytoplasmic, score: 8.87.
    
 0.764
ESL03653.1
Putative arginine 2-monooxygenase; KEGG: spn:SP_0916 5.9e-182 lysine decarboxylase K01582; Psort location: Cytoplasmic, score: 8.87.
    
 0.764
Your Current Organism:
Catonella morbi
NCBI taxonomy Id: 592026
Other names: C. morbi ATCC 51271, Catonella morbi ATCC 51271, Catonella morbi str. ATCC 51271, Catonella morbi strain ATCC 51271
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