Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EEW96456.1 | EEW96458.1 | GCWU000321_00401 | GCWU000321_00403 | Cell shape determining protein, MreB/Mrl family; KEGG: hpa:HPAG1_1318 2.4e-50 rod shape-determining protein K01529; Psort location: Cytoplasmic, score: 9.97. | Hypothetical protein. | 0.567 |
EEW96456.1 | murA | GCWU000321_00401 | GCWU000321_00402 | Cell shape determining protein, MreB/Mrl family; KEGG: hpa:HPAG1_1318 2.4e-50 rod shape-determining protein K01529; Psort location: Cytoplasmic, score: 9.97. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.883 |
EEW96458.1 | EEW96456.1 | GCWU000321_00403 | GCWU000321_00401 | Hypothetical protein. | Cell shape determining protein, MreB/Mrl family; KEGG: hpa:HPAG1_1318 2.4e-50 rod shape-determining protein K01529; Psort location: Cytoplasmic, score: 9.97. | 0.567 |
EEW96458.1 | murA | GCWU000321_00403 | GCWU000321_00402 | Hypothetical protein. | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.567 |
murA | EEW96456.1 | GCWU000321_00402 | GCWU000321_00401 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | Cell shape determining protein, MreB/Mrl family; KEGG: hpa:HPAG1_1318 2.4e-50 rod shape-determining protein K01529; Psort location: Cytoplasmic, score: 9.97. | 0.883 |
murA | EEW96458.1 | GCWU000321_00402 | GCWU000321_00403 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | Hypothetical protein. | 0.567 |