STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdhAKEGG: dsy:DSY0736 4.4e-90 frdA; fumarate reductase flavoprotein subunit K00238. (546 aa)    
Predicted Functional Partners:
EEW96933.1
KEGG: ssp:SSP1646 6.0e-31 succinate dehydrogenase iron-sulfur protein subunit K00240.
 
 0.999
nifJ
KEGG: cpr:CPR_2032 0. pyruvate-flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
  
 0.999
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
 0.985
EEW97279.1
KEGG: bca:BCE_3809 5.2e-135 pyruvate ferredoxin oxidoreductase, alpha subunit, putative K00174; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.948
EEW96931.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.794
EEW96934.1
ApbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
     
 0.793
EEW97983.1
4Fe-4S binding domain protein; KEGG: tte:TTE0128 5.5e-24 nuoI; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) K00338; Psort location: Cytoplasmic, score: 8.96.
  
 0.789
EEW97147.1
Aldehyde dehydrogenase (NAD) family protein; KEGG: fnu:FN0454 6.9e-172 aldehyde dehydrogenase B K00138; Psort location: Cytoplasmic, score: 9.26.
  
 0.777
EEW96935.1
Hypothetical protein.
       0.773
EEW96930.1
Hypothetical protein.
       0.768
Your Current Organism:
Dialister invisus
NCBI taxonomy Id: 592028
Other names: D. invisus DSM 15470, Dialister invisus DSM 15470, Dialister invisus str. DSM 15470, Dialister invisus strain DSM 15470
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.