Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDD_0010uracil-DNA glycosylase. (274 aa)    
Predicted Functional Partners:
DDD_1259
Hypothetical protein.
  
     0.692
DDD_1201
Hypothetical protein.
  
     0.648
DDD_1392
Putative outer membrane protein, OmpA family.
  
     0.627
DDD_2840
VCBS.
  
 
   0.613
DDD_2663
Secreted protein containing PKD domain.
  
 
   0.588
DDD_2860
VCBS.
  
 
   0.573
DDD_0045
Putative membrane-anchored cell surface protein.
  
 
   0.571
DDD_0419
Uncharacterized protein.
  
 
   0.571
DDD_1010
Membrane protein.
  
     0.569
DDD_3346
Hypothetical protein.
  
     0.569
Your Current Organism:
Nonlabens dokdonensis
NCBI taxonomy Id: 592029
Other names: Donghaeana dokdonensis DSW-6, N. dokdonensis DSW-6, Nonlabens dokdonensis DSW-6, Nonlabens dokdonensis str. DSW-6, Nonlabens dokdonensis strain DSW-6, Persicivirga dokdonensis DSW-6
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