STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDD_0035Putative TonB-dependent outer membrane receptor protein. (326 aa)    
Predicted Functional Partners:
DDD_1774
Uncharacterized protein.
 
  
0.571
DDD_0036
Hypothetical protein.
       0.487
DDD_1289
Signal peptide protein.
  
     0.482
DDD_1760
Putative lipoprotein.
  
     0.431
DDD_0251
Trypanothione synthetase domain protein.
  
     0.426
DDD_2346
Gamma-carotene hydroxylase.
  
     0.409
DDD_1775
Uncharacterized protein.
  
   0.406
DDD_1071
Putative TonB family protein.
  
   0.405
DDD_1933
Hypothetical protein.
  
   0.405
DDD_3061
Uncharacterized protein.
  
   0.405
Your Current Organism:
Nonlabens dokdonensis
NCBI taxonomy Id: 592029
Other names: Donghaeana dokdonensis DSW-6, N. dokdonensis DSW-6, Nonlabens dokdonensis DSW-6, Nonlabens dokdonensis str. DSW-6, Nonlabens dokdonensis strain DSW-6, Persicivirga dokdonensis DSW-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.