STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDD_1237Sodium/hydrogen antiporter. (618 aa)    
Predicted Functional Partners:
trkH
Trk system potassium K+ uptake protein.
  
 
 0.742
DDD_2506
Na+-transporting ATP synthase.
  
 
 0.742
DDD_2233
Thioredoxin reductase carring response regulator receiver domain protein.
  
  
 0.574
DDD_1236
Hypothetical protein.
       0.572
DDD_1238
MATE efflux family sodium antiporter.
 
 
 0.539
DDD_2777
K+-dependent Na+/Ca+ exchanger related protein.
 
 
 
 0.536
djlA
DnaJ-like protein DjlA.
 
 
 0.496
dnaK
Chaperone protein dnaK (Heat shock protein HSP70); Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.487
gltT
Sodium dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
 
 
 0.465
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
  
 0.463
Your Current Organism:
Nonlabens dokdonensis
NCBI taxonomy Id: 592029
Other names: Donghaeana dokdonensis DSW-6, N. dokdonensis DSW-6, Nonlabens dokdonensis DSW-6, Nonlabens dokdonensis str. DSW-6, Nonlabens dokdonensis strain DSW-6, Persicivirga dokdonensis DSW-6
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