STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDD_1699Sporulation domain-containing protein. (301 aa)    
Predicted Functional Partners:
DDD_0871
Hypothetical protein.
 
     0.752
DDD_1352
TPR domain protein.
 
     0.712
ykkB
YkkB.
       0.697
DDD_0363
Smr domain protein-possibly involved in DNA repair.
  
     0.693
DDD_3589
Hypothetical protein.
  
    0.648
DDD_1674
phenylalanyl-tRNA synthetase alpha subunit.
 
    0.646
DDD_2614
Hypothetical protein.
  
    0.638
DDD_3525
Hypothetical protein.
  
    0.627
DDD_2581
Acetyltransferase, GNAT family.
  
     0.626
DDD_2984
Putative transcriptional regulator.
  
     0.625
Your Current Organism:
Nonlabens dokdonensis
NCBI taxonomy Id: 592029
Other names: Donghaeana dokdonensis DSW-6, N. dokdonensis DSW-6, Nonlabens dokdonensis DSW-6, Nonlabens dokdonensis str. DSW-6, Nonlabens dokdonensis strain DSW-6, Persicivirga dokdonensis DSW-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.