STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDD_1925Hypothetical protein. (549 aa)    
Predicted Functional Partners:
DDD_1316
Secreted polysaccharide polymerase.
  
     0.649
DDD_2745
TPR domain protein.
  
     0.528
DDD_2753
Hypothetical protein.
  
     0.499
DDD_1926
Hypothetical protein.
       0.490
DDD_1927
DUF2383 domain containing protein.
       0.490
DDD_1950
Hypothetical protein.
  
     0.488
DDD_0841
Endonuclease/exonuclease/phosphatase.
  
    0.483
DDD_0676
ATPase associated with various cellular activities AAA_5.
  
     0.471
DDD_2752
Putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.465
DDD_2081
Putative aggregation factor core protein MAFp3, isoform C.
  
     0.460
Your Current Organism:
Nonlabens dokdonensis
NCBI taxonomy Id: 592029
Other names: Donghaeana dokdonensis DSW-6, N. dokdonensis DSW-6, Nonlabens dokdonensis DSW-6, Nonlabens dokdonensis str. DSW-6, Nonlabens dokdonensis strain DSW-6, Persicivirga dokdonensis DSW-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.