Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DDD_1985Peptidase S8 and S53, subtilisin, kexin, sedolisin. (979 aa)    
Predicted Functional Partners:
DDD_2408
Cell wall surface anchor family protein.
  
 
   0.478
DDD_2362
Exo-beta-1,3-glucanase.
  
     0.451
DDD_2354
Cellulase domain containing protein.
  
    0.415
purH
Phosphoribosylaminoimidazole carboxy formyl formyltransferase, bifunctional purine biosynthesis protein.
       0.414
DDD_2355
Glycosyl hydrolase, family 16.
  
     0.403
Your Current Organism:
Nonlabens dokdonensis
NCBI taxonomy Id: 592029
Other names: Donghaeana dokdonensis DSW-6, N. dokdonensis DSW-6, Nonlabens dokdonensis DSW-6, Nonlabens dokdonensis str. DSW-6, Nonlabens dokdonensis strain DSW-6, Persicivirga dokdonensis DSW-6
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