STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEU03127.1Penicillin-binding protein, transpeptidase domain protein; KEGG: tte:TTE1916 8.9e-92 ftsI4; Cell division protein FtsI/penicillin-binding protein 2 K03587; Psort location: CytoplasmicMembrane, score: 9.82. (596 aa)    
Predicted Functional Partners:
EEU03123.1
Putative cell division protein FtsW; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 0.986
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
 
  
 0.937
murD
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
  
 0.929
EEU03871.1
Cell cycle protein, FtsW/RodA/SpoVE family; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 0.927
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.910
EEU03870.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: swo:Swol_1638 1.7e-53 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
0.854
EEU03199.1
POTRA domain protein, FtsQ-type; Essential cell division protein.
  
 
 0.850
EEU03525.1
Transglycosylase; KEGG: ppd:Ppro_3195 7.9e-66 penicillin-binding protein, 1A family K05364; Psort location: Extracellular, score: 9.55.
  
 
0.769
murE
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.
  
 0.754
mraW
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
  
 0.725
Your Current Organism:
Eubacterium saphenum
NCBI taxonomy Id: 592031
Other names: E. saphenum ATCC 49989, Eubacterium saphenum ATCC 49989, Eubacterium saphenum str. ATCC 49989, Eubacterium saphenum strain ATCC 49989
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.