STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
deoDKEGG: sav:SAV2138 5.4e-53 deoD; purine nucleoside phosphorylase K03784; Psort location: Cytoplasmic, score: 8.87. (238 aa)    
Predicted Functional Partners:
EEU03215.1
KEGG: fnu:FN2073 2.7e-42 adenine phosphoribosyltransferase K00759; Psort location: Cytoplasmic, score: 8.87.
     
 0.920
hpt
KEGG: tte:TTE2394 6.0e-54 hpt; hypoxanthine-guanine phosphoribosyltransferase K00760; Psort location: Cytoplasmic, score: 9.98; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
 0.907
pdp
KEGG: ctc:CTC01993 3.4e-83 pyrimidine-nucleoside phosphorylase K00756; Psort location: CytoplasmicMembrane, score: 7.80.
  
 
 0.861
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
  
 
 0.849
tdk
Thymidine kinase; KEGG: sps:SPs0997 2.4e-50 putative thymidine kinase K00857; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.846
cobB
Transcriptional regulator, Sir2 family; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
    
 0.822
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
     
 0.812
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
    
  0.811
EEU03589.1
Iron dependent repressor DNA binding domain protein; Psort location: Cytoplasmic, score: 8.87.
       0.727
EEU03588.1
K+-dependent Na+/Ca+ exchanger family protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.539
Your Current Organism:
Eubacterium saphenum
NCBI taxonomy Id: 592031
Other names: E. saphenum ATCC 49989, Eubacterium saphenum ATCC 49989, Eubacterium saphenum str. ATCC 49989, Eubacterium saphenum strain ATCC 49989
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.