STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adiCArginine:agmatin antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)    
Predicted Functional Partners:
ANA28035.1
Arginine decarboxylase; Biodegradative; catalyzes the formation of agmatine from arginine; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.903
adiY
Transcriptional regulator; Regulates genes involved in arginine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.830
ANA31260.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.602
ANA28031.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.576
pmrB
Sensor protein BasS/PmrB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.498
basR
Response regulator in two-component regulatory system with BasS; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.493
ANA28034.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.486
arcA
Arginine deiminase; Catalyzes the degradation of arginine to citruline and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.477
speF
Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.425
ANA31066.1
Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.416
Your Current Organism:
Salmonella enterica diarizonae
NCBI taxonomy Id: 59204
Other names: ATCC 43973, CCUG 30040, CIP 82.31, DSM 14847, NCTC 10060, S. enterica subsp. diarizonae, Salmonella cholerae-suis subsp. diarizonae, Salmonella choleraesuis subsp. diarizonae, Salmonella enterica IIIb, Salmonella enterica serovar IIIb, Salmonella enterica subsp. IIIb, Salmonella enterica subsp. Subsp. IIIb, Salmonella enterica subsp. diarizonae
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