STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
steTAPC family amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (499 aa)    
Predicted Functional Partners:
ANA31079.1
Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.814
ANA28044.1
Periplasmic or exported protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.731
leuO_3
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
  
     0.689
chiA_2
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.687
fimA_5
Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.661
hpaA
4-hydroxyphenylacetate catabolism regulator HpaA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.655
puuB
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.652
ANA30728.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.627
ANA31511.1
Endolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.590
ybtU
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.584
Your Current Organism:
Salmonella enterica diarizonae
NCBI taxonomy Id: 59204
Other names: ATCC 43973, CCUG 30040, CIP 82.31, DSM 14847, NCTC 10060, S. enterica subsp. diarizonae, Salmonella cholerae-suis subsp. diarizonae, Salmonella choleraesuis subsp. diarizonae, Salmonella enterica IIIb, Salmonella enterica serovar IIIb, Salmonella enterica subsp. IIIb, Salmonella enterica subsp. Subsp. IIIb, Salmonella enterica subsp. diarizonae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.