node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANA31168.1 | afr | UQ49_20160 | UQ49_20165 | Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.599 |
ANA31168.1 | rlmG | UQ49_20160 | UQ49_20155 | Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.623 |
afr | ANA31168.1 | UQ49_20165 | UQ49_20160 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.599 |
afr | rlmG | UQ49_20165 | UQ49_20155 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.469 |
hslR | rlmG | UQ49_21530 | UQ49_20155 | Ribosome-associated heat shock protein Hsp15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HSP15 family. | Hypothetical protein; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.664 |
nusA | rlmG | UQ49_20485 | UQ49_20155 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | Hypothetical protein; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.411 |
nusA | rplA | UQ49_20485 | UQ49_01965 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.893 |
nusA | rpoB | UQ49_20485 | UQ49_01980 | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.995 |
obgE | rlmG | UQ49_20555 | UQ49_20155 | GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | Hypothetical protein; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.601 |
obgE | rplA | UQ49_20555 | UQ49_01965 | GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.812 |
obgE | rpoB | UQ49_20555 | UQ49_01980 | GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.435 |
rapA | rlmG | UQ49_04780 | UQ49_20155 | ATP-dependent helicase; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | Hypothetical protein; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 0.457 |
rapA | rpoB | UQ49_04780 | UQ49_01980 | ATP-dependent helicase; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.971 |
rlmG | ANA31168.1 | UQ49_20155 | UQ49_20160 | Hypothetical protein; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.623 |
rlmG | afr | UQ49_20155 | UQ49_20165 | Hypothetical protein; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.469 |
rlmG | hslR | UQ49_20155 | UQ49_21530 | Hypothetical protein; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | Ribosome-associated heat shock protein Hsp15; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HSP15 family. | 0.664 |
rlmG | nusA | UQ49_20155 | UQ49_20485 | Hypothetical protein; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | Transcription elongation factor NusA; Participates in both transcription termination and antitermination. | 0.411 |
rlmG | obgE | UQ49_20155 | UQ49_20555 | Hypothetical protein; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. | 0.601 |
rlmG | rapA | UQ49_20155 | UQ49_04780 | Hypothetical protein; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | ATP-dependent helicase; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.457 |
rlmG | rlmL | UQ49_20155 | UQ49_08840 | Hypothetical protein; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA. | 23S rRNA methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.434 |