Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ73882.1 | SDZ73894.1 | SAMN05421875_101132 | SAMN05421875_101133 | Pimeloyl-ACP methyl ester carboxylesterase. | Nitronate monooxygenase. | 0.559 |
SDZ73882.1 | SDZ73906.1 | SAMN05421875_101132 | SAMN05421875_101134 | Pimeloyl-ACP methyl ester carboxylesterase. | DNA-binding transcriptional regulator, IclR family. | 0.516 |
SDZ73894.1 | SDZ73882.1 | SAMN05421875_101133 | SAMN05421875_101132 | Nitronate monooxygenase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.559 |
SDZ73894.1 | SDZ73906.1 | SAMN05421875_101133 | SAMN05421875_101134 | Nitronate monooxygenase. | DNA-binding transcriptional regulator, IclR family. | 0.493 |
SDZ73906.1 | SDZ73882.1 | SAMN05421875_101134 | SAMN05421875_101132 | DNA-binding transcriptional regulator, IclR family. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.516 |
SDZ73906.1 | SDZ73894.1 | SAMN05421875_101134 | SAMN05421875_101133 | DNA-binding transcriptional regulator, IclR family. | Nitronate monooxygenase. | 0.493 |
SDZ73906.1 | SDZ96227.1 | SAMN05421875_101134 | SAMN05421875_103271 | DNA-binding transcriptional regulator, IclR family. | Hypothetical protein. | 0.525 |
SDZ73906.1 | SEA17371.1 | SAMN05421875_101134 | SAMN05421875_106141 | DNA-binding transcriptional regulator, IclR family. | Hypothetical protein. | 0.547 |
SDZ73906.1 | SEA25861.1 | SAMN05421875_101134 | SAMN05421875_10880 | DNA-binding transcriptional regulator, IclR family. | Indolepyruvate ferredoxin oxidoreductase. | 0.559 |
SDZ73906.1 | SEA28938.1 | SAMN05421875_101134 | SAMN05421875_10917 | DNA-binding transcriptional regulator, IclR family. | Branched-chain amino acid transport system substrate-binding protein. | 0.450 |
SDZ73906.1 | SEA54677.1 | SAMN05421875_101134 | SAMN05421875_1178 | DNA-binding transcriptional regulator, IclR family. | Sensor histidine kinase inhibitor, KipI family. | 0.946 |
SDZ96227.1 | SDZ73906.1 | SAMN05421875_103271 | SAMN05421875_101134 | Hypothetical protein. | DNA-binding transcriptional regulator, IclR family. | 0.525 |
SDZ96227.1 | SEA25861.1 | SAMN05421875_103271 | SAMN05421875_10880 | Hypothetical protein. | Indolepyruvate ferredoxin oxidoreductase. | 0.406 |
SDZ96227.1 | SEA28938.1 | SAMN05421875_103271 | SAMN05421875_10917 | Hypothetical protein. | Branched-chain amino acid transport system substrate-binding protein. | 0.423 |
SEA17371.1 | SDZ73906.1 | SAMN05421875_106141 | SAMN05421875_101134 | Hypothetical protein. | DNA-binding transcriptional regulator, IclR family. | 0.547 |
SEA17371.1 | SEA25861.1 | SAMN05421875_106141 | SAMN05421875_10880 | Hypothetical protein. | Indolepyruvate ferredoxin oxidoreductase. | 0.422 |
SEA17371.1 | SEA28938.1 | SAMN05421875_106141 | SAMN05421875_10917 | Hypothetical protein. | Branched-chain amino acid transport system substrate-binding protein. | 0.425 |
SEA25861.1 | SDZ73906.1 | SAMN05421875_10880 | SAMN05421875_101134 | Indolepyruvate ferredoxin oxidoreductase. | DNA-binding transcriptional regulator, IclR family. | 0.559 |
SEA25861.1 | SDZ96227.1 | SAMN05421875_10880 | SAMN05421875_103271 | Indolepyruvate ferredoxin oxidoreductase. | Hypothetical protein. | 0.406 |
SEA25861.1 | SEA17371.1 | SAMN05421875_10880 | SAMN05421875_106141 | Indolepyruvate ferredoxin oxidoreductase. | Hypothetical protein. | 0.422 |
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