STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ74435.1phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (343 aa)    
Predicted Functional Partners:
SDZ74421.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
 0.994
SEA80114.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.981
SEA75268.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 0.978
SEA80096.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.976
SEA75249.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
  
 0.972
SEA75182.1
Phospholipid transport system substrate-binding protein.
  
 0.956
SEA75220.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
     
 0.952
SEA75164.1
Phospholipid transport system transporter-binding protein.
  
 0.907
SDZ74448.1
Hypothetical protein.
       0.837
SEA39302.1
Flagellar motor protein MotB.
   
   0.715
Your Current Organism:
Acidovorax soli
NCBI taxonomy Id: 592050
Other names: A. soli, Acidovorax soli Choi et al. 2010, Acidovorax sp. BL21, DSM 25157, JCM 15909, KCTC 22399, strain BL21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.