STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ77420.1Hemoglobin/transferrin/lactoferrin receptor protein. (112 aa)    
Predicted Functional Partners:
SEA08786.1
Protein of unknown function.
    
 
 0.763
SEA35702.1
Hypothetical protein.
    
 
 0.763
SEA75487.1
Hypothetical protein.
    
 
 0.763
SDZ75899.1
Protein TonB.
  
 
 0.711
SDZ86520.1
Protein TonB.
  
 
 0.711
SDZ81719.1
Hypothetical protein.
  
 
 0.711
SEA82969.1
Colicin import membrane protein.
  
 
 0.711
SDZ77111.1
Hypothetical protein.
  
 
 0.700
SDZ77447.1
Nitrite reductase (NO-forming) / hydroxylamine reductase.
       0.485
SEA82283.1
Outer membrane receptor proteins, mostly Fe transport.
  
 
 0.400
Your Current Organism:
Acidovorax soli
NCBI taxonomy Id: 592050
Other names: A. soli, Acidovorax soli Choi et al. 2010, Acidovorax sp. BL21, DSM 25157, JCM 15909, KCTC 22399, strain BL21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.