STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA04275.1enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (254 aa)    
Predicted Functional Partners:
SEA10446.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.940
SDZ82182.1
Signal transduction histidine kinase.
    
 0.915
SEA81646.1
Two-component system, OmpR family, sensor histidine kinase TorS.
    
 0.915
SEA04210.1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  0.851
SEA04318.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  0.851
SEA28794.1
3-hydroxyacyl-CoA dehydrogenase.
   
0.847
SEA04143.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.826
SDZ76694.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.813
SEA94916.1
3-hydroxybutyryl-CoA dehydrogenase.
 
  0.813
SDZ94543.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.802
Your Current Organism:
Acidovorax soli
NCBI taxonomy Id: 592050
Other names: A. soli, Acidovorax soli Choi et al. 2010, Acidovorax sp. BL21, DSM 25157, JCM 15909, KCTC 22399, strain BL21
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