STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA37865.1Tripartite tricarboxylate transporter TctB family protein. (162 aa)    
Predicted Functional Partners:
SEA37840.1
TctA family transporter.
  
 
 0.922
SEA09808.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.761
SEA49185.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.755
SEA09850.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.754
SEA04027.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.737
SEA19516.1
Putative tricarboxylic transport membrane protein.
  
 
 0.711
SEA77645.1
Protein of unknown function.
  
     0.686
SDZ83975.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.663
SEA78934.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.658
SDZ90573.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.656
Your Current Organism:
Acidovorax soli
NCBI taxonomy Id: 592050
Other names: A. soli, Acidovorax soli Choi et al. 2010, Acidovorax sp. BL21, DSM 25157, JCM 15909, KCTC 22399, strain BL21
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.