STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA47020.13-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. (298 aa)    
Predicted Functional Partners:
SDZ75476.1
Enoyl-CoA hydratase/carnithine racemase.
 
  0.956
SEA46924.1
Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase.
 
 0.935
SEA77517.1
Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase.
 
 0.869
SEA46967.1
Hypothetical protein.
 
 
 0.808
SEA87894.1
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
 
    0.763
SEA07882.1
3-hydroxyisobutyrate dehydrogenase.
  
  
 
0.738
SEA56904.1
propionyl-CoA carboxylase alpha chain.
  
 
  0.711
SEA41772.1
4-carboxymuconolactone decarboxylase.
 
 
  0.698
SDZ73260.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
 
 
 0.689
SDZ95158.1
2-hydroxy-3-oxopropionate reductase.
  
  
 
0.689
Your Current Organism:
Acidovorax soli
NCBI taxonomy Id: 592050
Other names: A. soli, Acidovorax soli Choi et al. 2010, Acidovorax sp. BL21, DSM 25157, JCM 15909, KCTC 22399, strain BL21
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